BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022E03SP1|AL427908
(820 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1063 1615 0.0
>3x_Contig1063
Length = 5012
Score = 1615 bits (812), Expect = 0.0
Identities = 816/820 (99%)
Strand = Plus / Minus
Query: 1 ctgccattccgctgtcggtgattttactcaaaaggtcgatgaaatggacataaagcacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1757 ctgccattccgctgtcggtgattttactcaaaaggtcgatgaaatggacataaagcacat 1698
Query: 61 catcttcagctataatacatgtgagtgctcctacgaacaacgatggatggcagcacaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1697 catcttcagctataatacatgtgagtgctcctacgaacaacgatggatggcagcacaccc 1638
Query: 121 cacaagatgagtaataagggttgctataagaagttttcaccattgtgtatagaatacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1637 cacaagatgagtaataagggttgctataagaagttttcaccattgtgtatagaatacttt 1578
Query: 181 tgatctcaggagattttggatcaacatcaagaaagtacaccttgagawagacttccatta 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1577 tgatctcaggagattttggatcaacatcaagaaagtacaccttgagatagacttccatta 1518
Query: 241 gaaagtaaaacatgctatgcgatgcaagcattgaaaatttcaaccttaggtcagtcacgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1517 gaaagtaaaacatgctatgcgatgcaagcattgaaaatttcaaccttaggtcagtcacgt 1458
Query: 301 cgatgagattcaattctagattcgaatctaaaactgctgaacgctgtaattcatccagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1457 cgatgagattcaattctagattcgaatctaaaactgctgaacgctgtaattcatccagca 1398
Query: 361 attctctaccgaacatagataattgaggtaaaactgattttgtcgttccgttgactttga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1397 attctctaccgaacatagataattgaggtaaaactgattttgtcgttccgttgactttga 1338
Query: 421 aaaggaaaatgtttaatccggaaatatcgacgcctttgtctttaaattcgaacattcgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 aaaggaaaatgtttaatccggaaatatcgacgcctttgtctttaaattcgaacattcgca 1278
Query: 481 acaagaggtggaaatacacagagttgaggttattggacatacctttcaagagattgamag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1277 acaagaggtggaaatacacagagttgaggttattggacatacctttcaagagattgaaag 1218
Query: 541 aattgcctgttaacgacaacggagagctttcagtaaggaaagcagtctttgtgaattcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 aattgcctgttaacgacaacggagagctttcagtaaggaaagcagtctttgtgaattcag 1158
Query: 601 tgatatcaattaaagaaattccaaaattcgatgcgattgaagcggctgtttccgcatgac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1157 tgatatcaattaaagaaattccaaaattcgatgcgattgaagcggctgtttccgcatgac 1098
Query: 661 agaaccaatcccttaaaacactgtaaatatcagcagcattctgctctagatcggtcaatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 agaaccaatcccttaaaacactgtaaatatcagcagcattctgctctagatcggtcaatt 1038
Query: 721 gaccctttggcatcaatattgatgctctgatsaaaagctgttgacatcctctaagatgag 780
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1037 gaccctttggcatcaatattgatgctctgatcaaaagctgttgacatcctctaagatgag 978
Query: 781 ttctccagagattacttctcaaggsactattagcaaaaaa 820
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 977 ttctccagagattacttctcaaggcactattagcaaaaaa 938
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6147
Number of Sequences: 1807
Number of extensions: 6147
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 820
length of database: 10,358,551
effective HSP length: 16
effective length of query: 804
effective length of database: 10,329,639
effective search space: 8305029756
effective search space used: 8305029756
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)